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🔬 Unit 2 · Cell Structure & Function 🗂 Flashcards 🗺 Cheat Sheet Essentials 🎨 Visual Review 📝 MC Practice FRQ Practice

AP Biology Unit 2 Essentials

The must-know terms and big ideas for Unit 2: Cell Structure & Function. Every vocabulary word and concept you need to master.

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Big Idea 1
Compartmentalization made eukaryotes possible
Dividing the cell into membrane-bound organelles is the eukaryotic superpower. It lets incompatible reactions happen simultaneously in different rooms (lysosomes can be acidic without acidifying the cytoplasm), concentrates enzymes where they're needed, and creates specialized environments for things like ATP production (mitochondria) and photosynthesis (chloroplasts). The biggest piece of evidence for how this happened is endosymbiotic theory: mitochondria and chloroplasts were once free-living prokaryotes that took up residence inside a larger cell.
Compartmentalization Endosymbiosis Eukaryotes
Big Idea 2
The plasma membrane is selectively permeable because of its structure
The fluid mosaic model is more than memorization — it explains everything about what gets in and out of the cell. The hydrophobic interior of the phospholipid bilayer lets small nonpolar molecules slip through but blocks everything charged or large. To move those, the cell relies on embedded proteins: channels and carriers for facilitated diffusion, pumps for active transport, and vesicles for bulk transport. The structure of the membrane IS its function.
Plasma Membrane Selective Permeability Structure–Function
Big Idea 3
Cells use energy to maintain order against gradients
Diffusion and osmosis happen on their own — they're entropy doing its thing. But cells often need to keep things uneven: more K⁺ inside than outside, more Ca²⁺ in the ER than in the cytoplasm, a pH gradient across the mitochondrial membrane. Maintaining these gradients requires energy (ATP), and the gradients themselves are then used to do work — most importantly, to make more ATP in cellular respiration and photosynthesis. This sets up Unit 3.
Active Transport Energy Gradients
Prokaryote
A simple cell with no nucleus and no membrane-bound organelles. DNA is in a single circular chromosome in the nucleoid region. Bacteria and archaea are prokaryotes.
Cell Types
Eukaryote
A cell with a true membrane-bound nucleus and many membrane-bound organelles. Animals, plants, fungi, and protists are all eukaryotes.
Cell Types
Nucleoid
The region in a prokaryote where DNA is located. Not a membrane-bound nucleus — just an area where the circular chromosome is concentrated.
Cell Types
Nucleus
The eukaryotic organelle that stores DNA, controls gene expression, and is the site of DNA replication and transcription. Bounded by a double membrane (nuclear envelope) with nuclear pores.
Organelles
Nucleolus
A dense region inside the nucleus where ribosomal RNA is synthesized and ribosomes are assembled.
Organelles
Ribosome
The site of protein synthesis (translation). Composed of rRNA and proteins. Found free in the cytoplasm or attached to rough ER. Not membrane-bound — present in both prokaryotes and eukaryotes.
Organelles
Rough endoplasmic reticulum (RER)
Network of membranes studded with ribosomes; synthesizes proteins destined for secretion, the plasma membrane, or other organelles.
Organelles
Smooth endoplasmic reticulum (SER)
Network of membranes without ribosomes; synthesizes lipids, detoxifies drugs, and stores calcium ions.
Organelles
Golgi apparatus
A stack of flattened membrane sacs that modifies, sorts, and packages proteins and lipids received from the ER. Like the cell's post office.
Organelles
Mitochondrion
Double-membraned organelle that produces most of the cell's ATP through aerobic cellular respiration. Inner membrane folded into cristae; has its own DNA and ribosomes.
Organelles
Chloroplast
Double-membraned organelle in plants and algae that carries out photosynthesis. Contains stacks of thylakoids (grana) where light-dependent reactions occur. Has its own DNA and ribosomes.
Organelles
Lysosome
Membrane-bound sac of hydrolytic (digestive) enzymes that breaks down old organelles, food, and waste. Acidic interior keeps enzymes active. Found mainly in animal cells.
Organelles
Vacuole
Storage organelle. Plant cells have a large central vacuole that holds water, pigments, and waste and maintains turgor pressure. Animal cells have smaller vesicles and vacuoles.
Organelles
Peroxisome
Small organelle that breaks down fatty acids and detoxifies harmful substances (e.g., alcohol), producing hydrogen peroxide as a byproduct, which it then breaks down to water.
Organelles
Cytoskeleton
Protein fiber network (microtubules, microfilaments, intermediate filaments) that gives the cell shape, supports organelles, and drives movement — including cell division and vesicle transport.
Cell Structure
Cell wall
A rigid layer outside the plasma membrane in plants (cellulose), fungi (chitin), and most prokaryotes (peptidoglycan in bacteria). Provides structural support; absent in animal cells.
Cell Structure
Endomembrane system
The interconnected network of nuclear envelope, ER, Golgi, vesicles, lysosomes, and plasma membrane that work together to make, modify, and ship proteins and lipids.
Cell Structure
Endosymbiotic theory
The hypothesis that mitochondria and chloroplasts originated as free-living prokaryotes engulfed by a larger cell. Evidence: own DNA (circular), own ribosomes, double membranes, and reproduction by binary fission.
Cell Structure
Surface area to volume ratio
A geometric limit on cell size. Volume grows faster than surface area as a cell enlarges, so larger cells can't move materials across their membrane fast enough. Cells stay small or evolve folded surfaces (microvilli) to maintain a high SA:V.
Cell Structure
Plasma membrane
The boundary that separates a cell from its surroundings. Composed primarily of a phospholipid bilayer with embedded proteins, cholesterol, and outward-facing carbohydrates.
Membranes
Phospholipid bilayer
Two layers of phospholipids arranged tail-to-tail: hydrophilic heads face the watery exterior and interior, hydrophobic tails hide in the middle. The basis of all biological membranes.
Membranes
Fluid mosaic model
The accepted model of membrane structure: a fluid phospholipid bilayer with a mosaic of proteins, cholesterol, and other lipids that can move laterally within the membrane.
Membranes
Integral protein
A membrane protein that spans the bilayer or is firmly embedded in it. Often forms channels, transporters, or receptors. The hydrophobic middle of the protein interacts with the lipid tails.
Membranes
Peripheral protein
A membrane protein attached loosely to the surface (often anchored to integral proteins or lipid heads). Doesn't span the bilayer.
Membranes
Cholesterol
A lipid in animal cell membranes that regulates fluidity — keeps the membrane more fluid at cold temperatures and less fluid at high temperatures.
Membranes
Selective permeability
The property of a membrane that allows some substances through but not others. Small nonpolar molecules cross freely; charged and large molecules need transport proteins.
Membranes
Diffusion
The passive movement of molecules from an area of high concentration to an area of low concentration. Driven by random molecular motion; no energy required.
Transport
Osmosis
The passive diffusion of water across a selectively permeable membrane. Water moves from low solute concentration (high water concentration) to high solute concentration (low water concentration).
Transport
Passive transport
Movement of substances across a membrane down their concentration gradient. No energy (ATP) required. Includes diffusion, osmosis, and facilitated diffusion.
Transport
Facilitated diffusion
Passive transport of substances across the membrane through channel or carrier proteins. Moves down the gradient — no ATP required, but proteins are.
Transport
Channel protein
An integral protein that forms a hydrophilic tunnel through the membrane, allowing specific ions or small molecules to flow down their gradient. Aquaporins are channel proteins for water.
Transport
Carrier protein
An integral protein that binds a specific molecule, changes shape, and releases the molecule on the other side of the membrane. Used in both facilitated diffusion and active transport.
Transport
Active transport
Movement of substances against their concentration gradient. Requires energy (usually ATP) because it works against entropy. The Na⁺/K⁺ pump is the classic example.
Transport
Sodium-potassium pump (Na⁺/K⁺ pump)
An active transport protein that uses ATP to pump 3 Na⁺ out of the cell and 2 K⁺ in, against both gradients. Essential for nerve impulses and many other functions.
Transport
Endocytosis
Bulk transport into the cell. The plasma membrane folds inward to engulf substances in a vesicle. Three types: phagocytosis (large solids), pinocytosis (fluid), and receptor-mediated (specific molecules).
Transport
Exocytosis
Bulk transport out of the cell. A vesicle fuses with the plasma membrane and releases its contents to the exterior. Used for hormone secretion, neurotransmitter release, and waste removal.
Transport
Aquaporin
A channel protein that allows rapid passage of water through the plasma membrane. Important in kidney cells and plant cells where lots of water moves quickly.
Transport
Tonicity
The relative solute concentration of a solution compared to inside a cell. Determines whether water enters or leaves the cell by osmosis.
Tonicity
Hypertonic
A solution with HIGHER solute concentration than the cell. Water leaves the cell by osmosis — cell shrinks (animal: crenation; plant: plasmolysis).
Tonicity
Hypotonic
A solution with LOWER solute concentration than the cell. Water enters the cell by osmosis — cell swells (animal: may lyse; plant: becomes turgid, which is healthy).
Tonicity
Isotonic
A solution with the SAME solute concentration as the cell. No net movement of water — cell stays the same volume.
Tonicity
Turgor pressure
The pressure of water pushing against a plant cell's wall. Keeps non-woody plants upright. Lost when a plant cell is in a hypertonic environment — leading to wilting (plasmolysis).
Tonicity
Plasmolysis
The shrinking of the plasma membrane away from the cell wall when a plant cell is placed in a hypertonic solution. Results in wilting.
Tonicity
Osmoregulation
The active regulation of water and solute balance by cells or organisms. Important for organisms in environments where tonicity changes (e.g., freshwater vs. saltwater).
Tonicity